PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_570300g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 112aa    MW: 12570.3 Da    PI: 7.2114
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_570300g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.44.6e-075987129
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk 29
                    r+  +  rE+ RR++iN+ f+eL + l +
  MA_570300g0010 59 RKSHKADREKLRREKINEQFAELASALGE 87
                    4556678****************998755 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.11E-65297IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.01958107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.7E-55988IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-45987IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
MPANSNDAHL SFCQPLSENL LADFNVIPEF CPCKSTDQIL DFDAQFCNAN GGANRVFSRK  60
SHKADREKLR REKINEQFAE LASALGELEN CSISGILRLC NRLLFFGAKL KF
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1121231e-136BT112123.1 Picea glauca clone GQ03310_F20 mRNA sequence.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.24e-07bHLH family protein